Package: tip 0.1.0

Charles W. Harrison

tip: Bayesian Clustering Using the Table Invitation Prior (TIP)

Cluster data without specifying the number of clusters using the Table Invitation Prior (TIP) introduced in the paper "Clustering Gene Expression Using the Table Invitation Prior" by Charles W. Harrison, Qing He, and Hsin-Hsiung Huang (2022) <doi:10.3390/genes13112036>. TIP is a Bayesian prior that uses pairwise distance and similarity information to cluster vectors, matrices, or tensors.

Authors:Charles W. Harrison [cre, aut, cph], Qing He [aut, cph], Hsin-Hsiung Huang [aut, cph]

tip_0.1.0.tar.gz
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tip.pdf |tip.html
tip/json (API)

# Install 'tip' in R:
install.packages('tip', repos = c('https://charleswharrison.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/charleswharrison/tip/issues

On CRAN:

Conda:

5.02 score 42 scripts 154 downloads 8 exports 59 dependencies

Last updated 5 months agofrom:fe35a3b7ad. Checks:3 OK, 5 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 03 2025
R-4.5-winNOTEMar 03 2025
R-4.5-macNOTEMar 03 2025
R-4.5-linuxNOTEMar 03 2025
R-4.4-winNOTEMar 03 2025
R-4.4-macNOTEMar 03 2025
R-4.3-winOKMar 03 2025
R-4.3-macOKMar 03 2025

Exports:get_cpt_neighborsggnet2_network_plotggplot_line_pointggplot_number_of_clusters_histggplot_number_of_clusters_tracepartition_undirected_graphplottip

Dependencies:changepointclicodacodetoolscolorspacecpp11crayondoParalleldplyrfansifarverforcatsforeachgenericsGGallyggplot2ggstatsgluegtablehmsigraphisobanditeratorslabelingLaplacesDemonlatticelifecyclemagrittrMASSMatrixmgcvmniwmunsellnetworknlmepatchworkpillarpkgconfigplyrprettyunitsprogresspurrrR6RColorBrewerRcppRcppEigenrlangscalesstatnet.commonstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithrzoo

iris-NIW-vignette

Rendered fromvector-NIW-iris-vignette.Rmdusingknitr::rmarkdownon Mar 03 2025.

Last update: 2022-11-09
Started: 2022-10-23

matrix-clustering-CONSTANT-vignette

Rendered frommatrix-CONSTANT-simulated-vignette.Rmdusingknitr::rmarkdownon Mar 03 2025.

Last update: 2022-11-09
Started: 2022-10-23

matrix-clustering-MNIW-vignette

Rendered frommatrix-MNIW-simulated-vignette.Rmdusingknitr::rmarkdownon Mar 03 2025.

Last update: 2022-11-09
Started: 2022-10-23

tensor-clustering-CONSTANT-vignette

Rendered fromtensor-CONSTANT-simulated-vignette.Rmdusingknitr::rmarkdownon Mar 03 2025.

Last update: 2022-11-09
Started: 2022-10-23

usarrests-NIW-vignette

Rendered fromvector-NIW-usarrests-vignette.Rmdusingknitr::rmarkdownon Mar 03 2025.

Last update: 2022-11-09
Started: 2022-10-23