Package: tip 0.1.0

Charles W. Harrison

tip: Bayesian Clustering Using the Table Invitation Prior (TIP)

Cluster data without specifying the number of clusters using the Table Invitation Prior (TIP) introduced in the paper "Clustering Gene Expression Using the Table Invitation Prior" by Charles W. Harrison, Qing He, and Hsin-Hsiung Huang (2022) <doi:10.3390/genes13112036>. TIP is a Bayesian prior that uses pairwise distance and similarity information to cluster vectors, matrices, or tensors.

Authors:Charles W. Harrison [cre, aut, cph], Qing He [aut, cph], Hsin-Hsiung Huang [aut, cph]

tip_0.1.0.tar.gz
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tip_0.1.0.tgz(r-4.5-any)tip_0.1.0.tgz(r-4.4-any)tip_0.1.0.tgz(r-4.3-any)
tip_0.1.0.tar.gz(r-4.5-noble)tip_0.1.0.tar.gz(r-4.4-noble)
tip_0.1.0.tgz(r-4.4-emscripten)tip_0.1.0.tgz(r-4.3-emscripten)
tip.pdf |tip.html
tip/json (API)

# Install 'tip' in R:
install.packages('tip', repos = c('https://charleswharrison.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/charleswharrison/tip/issues

On CRAN:

Conda:

5.02 score 42 scripts 143 downloads 8 exports 59 dependencies

Last updated 5 months agofrom:fe35a3b7ad. Checks:3 OK, 6 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKApr 02 2025
R-4.5-winNOTEApr 02 2025
R-4.5-macNOTEApr 02 2025
R-4.5-linuxNOTEApr 02 2025
R-4.4-winNOTEApr 02 2025
R-4.4-macNOTEApr 02 2025
R-4.4-linuxNOTEApr 02 2025
R-4.3-winOKApr 02 2025
R-4.3-macOKApr 02 2025

Exports:get_cpt_neighborsggnet2_network_plotggplot_line_pointggplot_number_of_clusters_histggplot_number_of_clusters_tracepartition_undirected_graphplottip

Dependencies:changepointclicodacodetoolscolorspacecpp11crayondoParalleldplyrfansifarverforcatsforeachgenericsGGallyggplot2ggstatsgluegtablehmsigraphisobanditeratorslabelingLaplacesDemonlatticelifecyclemagrittrMASSMatrixmgcvmniwmunsellnetworknlmepatchworkpillarpkgconfigplyrprettyunitsprogresspurrrR6RColorBrewerRcppRcppEigenrlangscalesstatnet.commonstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithrzoo

iris-NIW-vignette

Rendered fromvector-NIW-iris-vignette.Rmdusingknitr::rmarkdownon Apr 02 2025.

Last update: 2022-11-09
Started: 2022-10-23

matrix-clustering-CONSTANT-vignette

Rendered frommatrix-CONSTANT-simulated-vignette.Rmdusingknitr::rmarkdownon Apr 02 2025.

Last update: 2022-11-09
Started: 2022-10-23

matrix-clustering-MNIW-vignette

Rendered frommatrix-MNIW-simulated-vignette.Rmdusingknitr::rmarkdownon Apr 02 2025.

Last update: 2022-11-09
Started: 2022-10-23

tensor-clustering-CONSTANT-vignette

Rendered fromtensor-CONSTANT-simulated-vignette.Rmdusingknitr::rmarkdownon Apr 02 2025.

Last update: 2022-11-09
Started: 2022-10-23

usarrests-NIW-vignette

Rendered fromvector-NIW-usarrests-vignette.Rmdusingknitr::rmarkdownon Apr 02 2025.

Last update: 2022-11-09
Started: 2022-10-23